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Journal Article
J. O’Donoghue and van Hemert, J. I., “Using the DCC Lifecycle Model to Curate a Gene Expression Database: A Case Study”, International Journal of Digital Curation, vol. 4, no. 3, 2009.
J. Rius, Cores, F., Solsona, F., van Hemert, J. I., Koetsier, J., and Notredame, C., “A user-friendly web portal for T-Coffee on supercomputers”, BMC Bioinformatics, vol. 12, 2011.
J. D. Armstrong and van Hemert, J. I., “Towards a Virtual Fly Brain”, Philosophical Transactions A, vol. 367, p. 2387--2397, 2009.
J. I. van Hemert and Bäck, T., “Robust parameter settings for variation operators by measuring the resampling ratio: A study on binary constraint satisfaction problems”, Journal of Heuristics, vol. 10, p. 629--640, 2004.
I. Juhos and van Hemert, J. I., “Increasing the efficiency of graph colouring algorithms with a representation based on vector operations”, Journal of Software, vol. 1, p. 24--33, 2006.
A. E. Eiben, van der Hauw, J. K., and van Hemert, J. I., “Graph Coloring with Adaptive Evolutionary Algorithms”, Journal of Heuristics, vol. 4, p. 25--46, 1998.
J. I. van Hemert and Koetsier, J., “Giving Computational Science a Friendly Face”, Zero-In, vol. 1, no. 3, p. 12--13, 2009.
J. I. van Hemert, “Evolving combinatorial problem instances that are difficult to solve”, Evolutionary Computation, vol. 14, p. 433--462, 2006.
J. I. van Hemert, “De Creatieve Computer”, AIgg Kennisgeving, vol. 13, p. 10--18, 2000.
R. R. Kitchen, Sabine, V. S., Sims, A. H., Macaskill, E. J., Renshaw, L., Thomas, J. S., van Hemert, J. I., Dixon, J. M., and Bartlett, J. M. S., “Correcting for intra-experiment variation in Illumina BeadChip data is necessary to generate robust gene-expression profiles”, BMC Genomics, vol. 11, no. 134, 2010.
B. G. W. Craenen, Eiben, A. E., and van Hemert, J. I., “Comparing Evolutionary Algorithms on Binary Constraint Satisfaction Problems”, IEEE Transactions on Evolutionary Computation, vol. 7, p. 424--444, 2003.
A. Barker, Weissman, J., and van Hemert, J. I., “The Circulate Architecture: Avoiding Workflow Bottlenecks Caused By Centralised Orchestration”, Cluster Computing, vol. 12, p. 221--235, 2009.
Conference Paper
R. Grim, Jansen, M. L. M., Baan, A., van Hemert, J. I., and de Wolf, H., “Use of Evolutionary Algorithms for Telescope Scheduling”, in Integrated Modeling of Telescopes, 2002, vol. 4757, p. 51--61.
A. Defaweux, Lenaerts, T., van Hemert, J. I., and Parent, J., “Transition Models as an incremental approach for problem solving in Evolutionary Algorithms”, in Proceedings of the Genetic and Evolutionary Computation Conference, 2005, p. 599--606.
J. I. van Hemert and Solnon, C., “A Study into Ant Colony Optimization, Evolutionary Computation and Constraint Programming on Binary Constraint Satisfaction Problems”, in Springer Lecture Notes on Computer Science, 2004, p. 114--123.
J. Eggermont and van Hemert, J. I., “Stepwise Adaptation of Weights for Symbolic Regression with Genetic Programming”, in Proceedings of the Twelfth Belgium/Netherlands Conference on Artificial Intelligence (BNAIC'00), 2000, p. 259--266.
A. E. Eiben, van Hemert, J. I., Marchiori, E., and Steenbeek, A. G., “Solving Binary Constraint Satisfaction Problems using Evolutionary Algorithms with an Adaptive Fitness Function”, in Springer Lecture Notes on Computer Science, 1998, p. 196--205.
J. Koetsier and van Hemert, J. I., “Rapid development of computational science portals”, in Proceedings of the IWPLS09 International Workshop on Portals for Life Sciences, Edinburgh, 2009.
J. Koetsier and van Hemert, J. I., “Rapid development of computational science portals”, in Proceedings of the IWPLS09 International Workshop on Portals for Life Sciences, Edinburgh, 2009.
J. Koetsier, Turner, A., Richardson, P., and van Hemert, J. I., “Rapid chemistry portals through engaging researchers”, in Fifth IEEE International Conference on e-Science, Oxford, UK, 2009, pp. 284-291.
J. I. van Hemert, “Property analysis of symmetric travelling salesman problem instances acquired through evolution”, in Springer Lecture Notes on Computer Science, 2005, p. 122--131.
S. Gesing, Kohlbacher, O., and van Hemert, J. I., “Portals for Life Sciences—a Brief Introduction”, in Proceedings of the IWPLS09 International Workshop on Portals for Life Sciences, 2009.
A. E. Eiben, Elia, D., and van Hemert, J. I., “Population dynamics and emerging features in AEGIS”, in Proceedings of the Genetic and Evolutionary Computation Conference, 1999, p. 1257--1264.
J. I. van Hemert and Urquhart, N. B., “Phase transition properties of clustered travelling salesman problem instances generated with evolutionary computation”, in LNCS, Birmingham, UK, 2004, vol. 3242, p. 150--159.
I. Juhos, Tóth, A., Tezuka, M., Tann, P., and van Hemert, J. I., “A new permutation model for solving the graph k-coloring problem”, in Kalmàr Workshop on Logic and Computer Science, 2003, p. 189--199.

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