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A. Nuñez, Filgueira, R., and Merayo, M. G., SANComSim: A Scalable, Adaptive and Non-intrusive Framework to Optimize Performance in Computational Science Applications, in ICCS, 2013.
A. E. Eiben and van Hemert, J. I., SAW-ing EAs: adapting the fitness function for solving constrained problems, in New ideas in optimization, D. Corne, Dorigo, M., and Glover, F., Eds. McGraw-Hill, London, 1999, p. 389--402.
M. P. Atkinson, Dmitriev, M. A., Hamilton, C., and Printezis, T., Scalable and Recoverable Implementation of Object Evolution for the PJama1 Platform , in Persistent Object Systems: Design, Implementation, and Use 9th International Workshop, POS-9 Lillehammer, Norway, September 6–8, 2000 Revised Papers, vol. 2135, G. N. C., Kirby, A. D., and Sjøberg, D. I. K., Eds. Springer, 2001, pp. 292-314,.
M. P. Atkinson, Dmitriev, M., Hamilton, C., and Printezis, T., Scalable and Recoverable Implementation of Object Evolution for the PJama1 Platform, in POS, 2000, pp. 292-314.
S. Gesing, Kacsuk, P., Kozlovszky, M., Birkenheuer, G., Blunk, D., Breuers, S., Brinkmann, A., Fels, G., Grunzke, R., Herres-Pawlis, S., Krüger, J., Packschies, L., Müller-Pfefferkorn, R., Schäfer, P., Steinke, T., Fabri, A. Szikszay, Warzecha, K., Wewior, M., and Kohlbacher, O., A Science Gateway for Molecular Simulations, in EGI User Forum 2011, 2011.
S. Gesing, Herres-Pawlis, S., Birkenheuer, G., Brinkmann, A., Grunzke, R., Kacsuk, P., Kohlbacher, O., Kozlovszky, M., Krüger, J., Müller-Pfefferkorn, R., Schäfer, P., and Steinke, T., A Science Gateway Getting Ready for Serving the International Molecular Simulation Community, in Proceedings of Science, 2012.
A. Barker and van Hemert, J., Scientific Workflow: A Survey and Research Directions, in Lecture Notes in Computer Science, 2008, vol. 4967, p. 746--753.
I. A. Klampanos and Jose, J. M., Searching in peer-to-peer networks , Computer Science Review (Elsevier), 2012.
L. Han, The Self-adaptation to dynamic failures for efficient Virtual Organization formation in Grid computing context, Chaos, Solitons and Fractals, 2008.
L. Han and Berry, D., Semantic-Supported and Agent-Based Decentralized Grid Resource Discovery, Future Generation Computer Systems, vol. 24, no. 8, pp. 806-812 , 2008.
O. Corcho, Sharing and Reuse in Knowledge Discovery, in THE DATA BONANZA: Improving Knowledge Discovery for Science, Engineering and Business, M. Atkinson, Baxter, R., Brezany, P., Corcho, O., Galea, M., Parsons, M., Snelling, D., and van Hemert, J., Eds. John Wiley & Sons Ltd., 2013, pp. 181-192.
J. Watt, Ajayi, O., Jiang, J., Koetsier, J., and Sinnott, R. O., A Shibboleth-Protected Privilege Management Infrastructure for e-Science Education, in Sixth IEEE International Symposium on Cluster Computing and the Grid (CCGrid 2006, Singapore, 2006, p. 357--364.
A. Nuñez, Fernández, J., Filgueira, R., Carballeira, F. G., and Carretero, J., SIMCAN: A flexible, scalable and expandable simulation platform for modelling and simulating distributed architectures and applications, Simulation Modelling Practice and Theory, vol. 20, pp. 12-32, 2012.
K. Schneeberger, Hagmann, J., Ossowski, S., Warthmann, N., Gesing, S., Kohlbacher, O., and Weigel, D., Simultaneous alignment of short reads against multiple genomes, Genome Biol, vol. 10, p. R98, 2009.
S. Gesing, Grunzke, R., Krüger, J., Birkenheuer, G., Wewior, M., Schäfer, P., Schuller, B., Schuster, J., Herres-Pawlis, S., Breuers, S., Balaskó, Á., Kozlovszky, M., Fabri, A. S., Packschies, L., Kacsuk, P., Blunk, D., Steinke, T., Brinkmann, A., Fels, G., Müller-Pfefferkorn, R., Jäkel, R., and Kohlbacher, O., A Single Sign-On Infrastructure for Science Gateways on a Use Case for Structural Bioinformatics, Journal of Grid Computing, vol. 10, pp. 769-790, 2012.
A. E. Eiben, van Hemert, J. I., Marchiori, E., and Steenbeek, A. G., Solving Binary Constraint Satisfaction Problems using Evolutionary Algorithms with an Adaptive Fitness Function, in Springer Lecture Notes on Computer Science, 1998, p. 196--205.
S. Gesing, van Hemert, J., Kacsuk, P., and Kohlbacher, O., Special Issue: Portals for life sciences---Providing intuitive access to bioinformatic tools, Concurrency and Computation: Practice and Experience, vol. 23, no. 23, p. 223--234, 2011.
D. W. Walker, Atkinson, M. P., and Sommerville, I., Special Issue: Selected Papers from the 2004 U.K. e-Science All Hands Meeting, All Hands Meeting 2004, vol. 19. John Wiley & Sons Ltd, Nottingham, UK, pp. 129-131, 2007.
J. D. Garcia, Carretero, J., Pérez, J. M., Carballeira, F. G., and Filgueira, R., Specifying use case behavior with interaction models, Journal of Object Technology, vol. 4, pp. 143-159, 2005.
J. M. P. F. G. R. F. José Daniel García, Jesús Carretero, Specifying use case behavior with interaction models, Journal of Object Technology, vol. 4, no. 9, p. 16, 2005.
N. J. Harding and Atkinson, M. P., SPLAT: (Suffix-tree Powered Local Alignment Tool): A Full-Sensitivity Protein Database Search Program that Accelerates the Smith-Waterman Algorithm using a Generalised Suffix Tree Index., University of Glasgow, 2004.
R. R. Kitchen, Kubista, M., and Tichopad, A., Statistical aspects of quantitative real-time PCR experiment design, Methods, vol. 50, no. 4, pp. 231-236, 2010.
J. Eggermont and van Hemert, J. I., Stepwise Adaptation of Weights for Symbolic Regression with Genetic Programming, in Proceedings of the Twelfth Belgium/Netherlands Conference on Artificial Intelligence (BNAIC'00), 2000, p. 259--266.
M. Atkinson, Meer, E. V., Fergusson, D., Davenhall, C., and Mehammed, H., Strategies and Policies to Support and Advance Education in e-Science, Computing Now, 2009.
D. ’ F. S. W. e-Science Group, Atkinson, M., Britton, D., Coveney, P., De Roure, D., Garnett, N., Geddes, N., Gurney, R., Haines, K., Hughes, L., Ingram, D., Jeffreys, P., Lyon, L., Osborne, I., Perrott, P., R., P., and Rusbridge, C., A Strategy for Research and Innovation in the Century of Information, Prometheus, vol. 27, pp. 27-45, 2009.

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